Plots UMAP colored by cell annotation — plot_umap_annot • MAYA

Plots UMAP colored by cell annotation

plot_umap_annot(umap, type = "Cell type", labels, title = NULL, colors = NULL)

Arguments

umap: UMAP object
type: Description of the labels that are plotted (cell type, unsupervised clusters,...)
labels: Character vector, containing annotation for cells, in the same order as cells in the umap object
title: Title of the plot.
colors: List of colors, else default custom palette colors will be used

Value

UMAP plot